<?xml version="1.0" encoding="UTF-8"?><rss version="2.0"><channel><title>DNA Puzzles</title><description>Welcome to the DNA puzzles, Citizen Science Lab!</description><link>https://dnapuzzles.org/</link><item><title>A look back (and a look ahead) on citizen science</title><link>https://dnapuzzles.org/blog/a-look-back-and-a-look-ahead-on-citizen-science/</link><guid isPermaLink="true">https://dnapuzzles.org/blog/a-look-back-and-a-look-ahead-on-citizen-science/</guid><description>Community-submitted Borderlands Science solutions power a multi-step realignment pipeline that refines biological sequence alignments through filtering, consensus mapping, progressive alignment, and post-processing.</description><pubDate>Tue, 14 May 2024 04:00:00 GMT</pubDate></item><item><title>“Too many to count.” FL4K, the Beastmaster.</title><link>https://dnapuzzles.org/blog/too-many-to-count-fl4k-the-beastmaster/</link><guid isPermaLink="true">https://dnapuzzles.org/blog/too-many-to-count-fl4k-the-beastmaster/</guid><description>Community-submitted Borderlands Science solutions power a multi-step realignment pipeline that refines biological sequence alignments through filtering, consensus mapping, progressive alignment, and post-processing.</description><pubDate>Sun, 05 May 2024 04:00:00 GMT</pubDate></item><item><title>When Borderlands Science meets Project Discovery</title><link>https://dnapuzzles.org/blog/when-borderlands-science-meets-project-discovery/</link><guid isPermaLink="true">https://dnapuzzles.org/blog/when-borderlands-science-meets-project-discovery/</guid><description>Recaps citizen science milestones in Iceland, highlights new Project Discovery results and future phases, and reflects on the meeting of Project Discovery and Borderlands Science at major gaming events</description><pubDate>Mon, 13 Nov 2023 05:00:00 GMT</pubDate></item><item><title>BORROWING successful strategies FROM participants</title><link>https://dnapuzzles.org/blog/insights-from-how-humans-play-borderlands-science-2/</link><guid isPermaLink="true">https://dnapuzzles.org/blog/insights-from-how-humans-play-borderlands-science-2/</guid><description>Explores using reinforcement and imitation learning to learn successful player strategies and predict human-like puzzle moves from Borderlands Science data</description><pubDate>Thu, 07 Apr 2022 04:00:00 GMT</pubDate></item><item><title>Insights From How Humans Play Borderlands Science</title><link>https://dnapuzzles.org/blog/insights-from-how-humans-play-borderlands-science/</link><guid isPermaLink="true">https://dnapuzzles.org/blog/insights-from-how-humans-play-borderlands-science/</guid><description>Explores common player-solving patterns, compares human strategies with algorithmic ones, and shows how gameplay behavior may help improve future alignment methods</description><pubDate>Thu, 09 Dec 2021 05:00:00 GMT</pubDate></item><item><title>How to know these puzzles are right for you</title><link>https://dnapuzzles.org/blog/how-to-know-these-puzzles-are-right-for-you/</link><guid isPermaLink="true">https://dnapuzzles.org/blog/how-to-know-these-puzzles-are-right-for-you/</guid><description>Explains how Borderlands Science generates and filters playable puzzles, optimizes a greedy scoring algorithm, and still relies on human players because algorithmic solutions are limited and biased</description><pubDate>Wed, 29 Sep 2021 04:00:00 GMT</pubDate></item><item><title>Would you like to know more?</title><link>https://dnapuzzles.org/blog/would-you-like-to-know-more/</link><guid isPermaLink="true">https://dnapuzzles.org/blog/would-you-like-to-know-more/</guid><description>Recaps major project updates, including a documentary, 2 million Borderlands Science participants, a Webby award for Project Discovery, and several public talks and community events</description><pubDate>Tue, 25 May 2021 04:00:00 GMT</pubDate></item><item><title>Using puzzle solutions to aerate alignments</title><link>https://dnapuzzles.org/blog/using-puzzle-solutions-to-aerate-alignments/</link><guid isPermaLink="true">https://dnapuzzles.org/blog/using-puzzle-solutions-to-aerate-alignments/</guid><description>Shows how player solutions help “aerate” DNA alignments by adding better-placed gaps, improving sequence organization, and guiding ongoing puzzle generation toward unclear regions</description><pubDate>Tue, 09 Feb 2021 05:00:00 GMT</pubDate></item><item><title>Towards a first takeaway from borderlands science – phase 1</title><link>https://dnapuzzles.org/blog/towards-a-first-takeaway-from-borderlands-science-phase-1/</link><guid isPermaLink="true">https://dnapuzzles.org/blog/towards-a-first-takeaway-from-borderlands-science-phase-1/</guid><description>Summarizes Phase 1 data processing, explains how millions of player votes are turned into consensus DNA alignments, and shows broad coverage across puzzle types and sequence regions</description><pubDate>Tue, 15 Dec 2020 05:00:00 GMT</pubDate></item><item><title>Not all mutations are equal</title><link>https://dnapuzzles.org/blog/not-all-mutations-are-equal/</link><guid isPermaLink="true">https://dnapuzzles.org/blog/not-all-mutations-are-equal/</guid><description>Explains why some DNA regions mutate more than others, why perfect alignments are hard to define, and how player patterns help reveal biologically informative differences</description><pubDate>Tue, 01 Sep 2020 04:00:00 GMT</pubDate></item><item><title>From Phylo to Borderlands Science</title><link>https://dnapuzzles.org/blog/from-phylo-to-borderlands-science/</link><guid isPermaLink="true">https://dnapuzzles.org/blog/from-phylo-to-borderlands-science/</guid><description>Traces Borderlands Science back to Phylo, compares their scientific goals and scale, and shows how years of citizen-science design evolved into a more accessible game</description><pubDate>Mon, 17 Aug 2020 04:00:00 GMT</pubDate></item><item><title>Decoding Player Submissions: identifying the best answers without knowing the right answer</title><link>https://dnapuzzles.org/blog/decoding-player-submissions-identifying-the-best-answers-without-knowing-the-right-answer/</link><guid isPermaLink="true">https://dnapuzzles.org/blog/decoding-player-submissions-identifying-the-best-answers-without-knowing-the-right-answer/</guid><description>Explains how Borderlands Science identifies strong player solutions using Pareto optimality, balancing score gains against gap use when no single perfect answer exists</description><pubDate>Wed, 08 Jul 2020 04:00:00 GMT</pubDate></item><item><title>What we&apos;ve been up to and what is coming for borderlands science</title><link>https://dnapuzzles.org/blog/what-weve-been-up-to-and-what-is-coming-for-borderlands-science/</link><guid isPermaLink="true">https://dnapuzzles.org/blog/what-weve-been-up-to-and-what-is-coming-for-borderlands-science/</guid><description>Reports huge early participation, compares Borderlands Science scale to Phylo, shows players consistently improve puzzle scores, and previews analysis plus more advanced future puzzles</description><pubDate>Sun, 07 Jun 2020 04:00:00 GMT</pubDate></item><item><title>A PEEK AT THE DATA</title><link>https://dnapuzzles.org/blog/borderlands-science-update-a-peek-at-the-data/</link><guid isPermaLink="true">https://dnapuzzles.org/blog/borderlands-science-update-a-peek-at-the-data/</guid><description>Shares early Borderlands Science data, shows players often improve on computer alignments, highlights useful variation across human solutions, and previews progress toward Phase 2</description><pubDate>Thu, 07 May 2020 04:00:00 GMT</pubDate></item><item><title>Am I really helping by playing Borderlands Science?</title><link>https://dnapuzzles.org/blog/am-i-really-helping-by-playing-borderlands-science/</link><guid isPermaLink="true">https://dnapuzzles.org/blog/am-i-really-helping-by-playing-borderlands-science/</guid><description>Explains how Borderlands Science puzzles help align bacterial DNA, why human solutions matter, how scores and gaps work, and how player strategies can train future AI</description><pubDate>Mon, 13 Apr 2020 04:00:00 GMT</pubDate></item><item><title>Borderlands Science is live!</title><link>https://dnapuzzles.org/blog/bls-live/</link><guid isPermaLink="true">https://dnapuzzles.org/blog/bls-live/</guid><description>Released Borderlands Science in Borderlands 3, launched with Gearbox/MMOS/Microsetta collaboration, players can help microbiome research through gameplay</description><pubDate>Tue, 07 Apr 2020 04:00:00 GMT</pubDate></item></channel></rss>